Bioimage informatics, Computational bioimaging, Bioimage analysis, Image processing, Super-resolution microscopy
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Biomedical-Imaging-Group/DeconvolutionLab2
Biomedical-Imaging-Group/DeconvolutionLab2 PublicJava (ImageJ/Fiji) software package for 3D deconvolution microscopy
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Biomedical-Imaging-Group/OrientationJ
Biomedical-Imaging-Group/OrientationJ PublicMeasure the orientation of fibers and structures in 2D images — ImageJ/Fiji plugins based on the gradient structure tensor, with docs, theory, assessment, and test images.
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SMLM-Challenge/Challenge2016
SMLM-Challenge/Challenge2016 PublicSingle-Molecule Localization Microscopy - Software Benchmarking - Challenge 2016
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Biomedical-Imaging-Group/EDF-Extended-Depth-of-Field
Biomedical-Imaging-Group/EDF-Extended-Depth-of-Field PublicAn ImageJ plugin for stack focusing. Implementation of several algorithms form max-variance to max-wavelets.
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