Medical Student / MD Candidate at Università degli Studi di Napoli Federico II
Department of Clinical Medicine and Surgery · School of Medicine and Surgery · Naples, Italy
ORCID: 0009-0007-0931-3555 · LinkedIn · l.celebrano@studenti.unina.it
Computational Oncology · Biophysical Reaction-Diffusion Modeling · Spatial Multi-Omics · Digital Pathology AI
| Project | What It Solves & Why It Matters | 1-Click Access & Verified Production |
|---|---|---|
| 👑 Spatial Continuum Oncology |
Why do 68% of lung cancers relapse post-ADAURA? Biophysical reaction-diffusion solver resolving why drug-sensitive persister cells survive in a 34.1 $\mu$m unperfused sanctuary cuff ( |
🎮 60 FPS Simulator · 🏥 Web App |
| 🩺 MedTerminal Cardio-Toracico |
High-Yield Medical Exam Prep & Active Recall Engine Piattaforma didattica interattiva per studenti di medicina che demolisce lo studio mnemonico noioso: modelli 3D WebGL (Three.js), monitor ECG dinamici per riconoscere aritmie e STEMI al volo, fonoteca Littmann reale e quiz d'esame commentati. |
▶ Prova la Piattaforma Didattica ↗React 19 · TypeScript · Three.js (Live Production)
|
| 👁️ InSituVision-AI |
Ultra-Low-Cost (< €5) Diagnostic AI Deep learning Attention-MIL neural network predicting microvascular decoupling and relapse risk directly from routine H&E whole-slide images. |
🌐 Live Vision PortalPyTorch Attention-MIL
|
| 📐 Spatial Oncology Master |
Bessel Cylindrical reaction-diffusion transport solver, Monte Carlo parameter sensitivity (10k draws), and stage-adjusted Cox modeling on real clinical cohorts. |
🐳 Docker GHCR · 🌐 Web Portal Springer Journal of Mathematical Biology
|
Translational oncology and computational biophysics program investigating non-genetic targeted therapy resistance, reaction-diffusion drug transport, and low-cost diagnostic AI in EGFR-mutant non-small cell lung cancer (NSCLC). Affiliated with the Department of Clinical Medicine and Surgery, School of Medicine and Surgery, Università degli Studi di Napoli Federico II, Naples, Italy.
Conditions for Pharmacological Sanctuaries in Perivascular Tumour Cords: A Reaction–Diffusion Analysis, a Regrowth-Kinetics Identity, and a Descriptive Survival Analysis of Histologic Subtype in Resected Lung Adenocarcinoma
Target Journal: Nature Communications (Under Consideration, Tracking NCOMMS-26-091227)
Preprint DOI: 10.21203/rs.3.rs-11530312/v1 | Zenodo Master Archive: 10.5281/zenodo.23754999
- Oral Keynote Master Slide Deck (12 Slides): 👉 Open Presentation
- Official Congress Poster (120×90 cm Vector): 👉 View Poster
- Author-Reviewed Lay Summary (Gist.Science): 👉 Read Plain-Language Digest
- Full Camera-Ready Manuscript PDF: 👉 Download PDF
Official clinical AI and computational biology laboratory of Università degli Studi di Napoli Federico II on Hugging Face:
🔗 huggingface.co/spatial-continuum-lab
┌────────────────────────────────────────────────────────────────────────┐
│ 🤗 spatial-continuum-lab (Federico II) │
├────────────────────────────────┬───────────────────────────────────────┤
│ 🩺 Bedside CRI Decision Engine │ Official bedside clinical risk web app│
│ (Interactive Space) │ https://huggingface.co/spaces/ │
│ │ spatial-continuum-lab/ │
│ │ spatial-continuum-clinical-app │
├────────────────────────────────┼───────────────────────────────────────┤
│ 🧬 Biophysical Digital Twin │ 60 FPS perivascular reaction-diffusion│
│ (Simulator Space) │ https://huggingface.co/spaces/ │
│ │ spatial-continuum-lab/simulator │
├────────────────────────────────┼───────────────────────────────────────┤
│ 📊 MSKCC LUAD Spatial Cohort │ Curated multicenter cohort (N=1,274) │
│ (Public Dataset) │ https://huggingface.co/datasets/ │
│ │ spatial-continuum-lab/ │
│ │ mskcc-lung-adenocarcinoma-spatial-... │
└────────────────────────────────┴───────────────────────────────────────┘
| Research Repository | Biophysical & Algorithmic Scope | Clinical Cohort / Evidence | Interactive Demos & Registries |
|---|---|---|---|
| 👑 Spatial Continuum Oncology |
Grand Unified Theory: Full reaction-diffusion continuum, modified Bessel |
Multi-scale continuum • Zero third-party dependencies • Pure Python stdlib |
Grand Unified Portal |
| Reaction-Diffusion Solver |
Biophysical Transport: Perivascular cords, sanctuary sleeves ( |
MSKCC clinical survival validation ( |
Module 1: Bedside CRI |
| Study 4: InSituVision-AI | Ultra-low-cost (< 5 €) diagnostic AI: Attention-MIL neural network predicting microvascular decoupling directly from routine H&E WSIs. |
|
Live Vision Portal |
| Study 3: Massive Validation |
Multi-cohort survival validation: Microvascular decoupling truncates median PFS from 78.6 to 24.0 mo ( |
|
Module 5: Evidence |
| Study 2: Spatial Architecture |
Subcellular transport limits: Microvascular decoupling in dense homotypic tumor sheets exceeding the |
10x Visium HD ( |
Module 2: Visium HD |
| Study 1: InSituGame |
In situ evolutionary game assay: Infers tumor subclonal payoff matrices ( |
Pan-cancer ( |
Module 4: InSituGame |
All computational pipelines and CLI solvers are permanently packaged, versioned, and indexed in official public package managers:
# 1. Install the Grand Unified Spatial Continuum Framework (Flagship CLI)
conda install -c bioconda spatial-continuum
# 2. Or run via BioContainers Docker (Cloud / Cluster)
docker run --rm quay.io/biocontainers/spatial-continuum:1.0.2--pyhdfd78af_0 cri-calc --help
# 3. Or run via BioContainers Singularity (HPC / Hospital Clusters without root)
singularity exec https://depot.galaxyproject.org/singularity/spatial-continuum:1.0.2--pyhdfd78af_0 cri-calc --help
# 4. Install the In Situ Evolutionary Game Assay Engine
conda install -c bioconda insitugame
# 5. Install the Reaction-Diffusion Biophysical Sanctuary Solver
conda install -c bioconda spatial-sanctuaryAn interactive multimodal clinical simulation and educational platform developed for medical students at Università degli Studi di Napoli Federico II:
- 3D Interactive WebGL Anatomy: Anatomical cardiac and thoracic models powered by Three.js.
- Simulated Real-Time ECG Telemetry: Dynamic waveform rendering across normal sinus rhythm, conduction blocks, and acute STEMI/NSTEMI patterns.
- Remastered Clinical Auscultation: High-fidelity audio syntheses of cardiac murmurs (AS, MR, AR) and respiratory lung sounds.
- Active Recall Diagnostic Modules: Case-based clinical reasoning puzzles and bedside medical calculators.
- Modern Web Stack: Built with
React 19,TypeScript,Three.js, andTailwind CSS v4.
👉 Explore the live educational platform ↗
A verified record of peer-reviewed and merged contributions across bioinformatics, computational oncology, and core software ecosystems:
| Ecosystem / Registry | Pull Request & Contribution Scope | Verification Status |
|---|---|---|
| Bioconda Recipes | Official conda packaging: spatial-continuum v1.0.2 (#70930) |
Merged & Live |
| BioContainers | Pre-built Docker (quay.io) & Singularity (.sif) images for spatial-continuum |
Live & Verified |
| Galaxy Project / IUC | Official Galaxy tool wrapper for spatial-continuum (cri_calc) (#8838) |
PR Open (Under Review) |
| Snakemake Wrappers | Official Snakemake pipeline wrapper for spatial-continuum (cri-calc) (#6233) |
PR Open (Under Review) |
| Bioconda Recipes | Official conda packaging: insitugame v1.0.7 (#70893) |
Merged & Live |
| Bioconda Recipes | Official conda packaging: spatial-sanctuary v2.2.2 (#70840) |
Merged & Live |
| nf-core / modules | Nextflow DSL2 module: spatialcontinuum with Seqera Wave container (#13487) |
100% CI Green |
| nf-core / modules | Nextflow DSL2 module: insitugame with Seqera Wave container (#13471) |
100% CI Green |
| nf-core / modules | PostprocessGermlineCNVCalls output extension fix (#13080) | Merged |
| nf-core / modules | ABRA2 BAM index BAI snapshot pattern correction (#13039) | Merged |
| Awesome-AI4DigitalPathology | Digital pathology and spatial multi-omics additions (#28, #29) | Merged |
| awesome-single-cell | Spatial transcriptomics biophysics and continuum frameworks (#399, #404) | Both Merged |
| awesome-healthcare | Open-source clinical decision support and computational oncology indexing (#180) | Under Review |
| Spatial Transcriptomics Tools | Spatial pharmacokinetics and multi-scale biophysics catalog (#21) | Under Review |
| Ecosystem / Project | Pull Request & Contribution Scope | Verification Status |
|---|---|---|
| Angular | Fix DevTools signal inspection buttons on host API support (#70986) | Merged |
| viem | Mainnet Plasma token definitions and Kortana EVM network support (#5108, #5136) | Both Merged |
| Ethereum Lists | Sonic mainnet RPC endpoint additions (#8730) | Merged |
| DefiLlama | Fee adapters, BSC telemetry, and yield protocol calibration (#9838, #9453) | Both Merged |
- Primary Institutional Affiliation:
Department of Clinical Medicine and Surgery, School of Medicine and Surgery
Università degli Studi di Napoli Federico II, Naples, Italy - Academic Email: l.celebrano@studenti.unina.it
- Personal Contact: luca.celebrano1@gmail.com
- ORCID: 0009-0007-0931-3555
- LinkedIn Profile: linkedin.com/in/luca-celebrano
- GitHub Profile: @Lukecele
- Hugging Face Hub: @spatial-continuum-lab


